Table 1 Overview of data files/data sets
From: De Novo transcriptome assembly and annotation of the wild service tree Sorbus torminalis (L.) Crantz
Label | Name of data file/data set | File types (file extension) | Data repository and identifier (DOI or accession number) |
|---|---|---|---|
Data file 1 | RNA-seq dataset obtained in this study | Fastq file (.fastq) | |
Data file 2 | Methodology | MS Word file (.docx) | Figshare https://doiorg.publicaciones.saludcastillayleon.es/10.6084/m9.figshare.26021323 [15] |
Data file 3 | MultiQC reads quality statistics | Image file (.jpg) | Figshare https://doiorg.publicaciones.saludcastillayleon.es/10.6084/m9.figshare.26021386 [16] |
Data file 4 | RNA-seq de novo transcriptome assembly | Fasta file (.fasta) | |
Data file 5 | Open reading frames (ORFs) prediction | Fasta file (.fasta) | Figshare https://doiorg.publicaciones.saludcastillayleon.es/10.6084/m9.figshare.26021413 [18] |
Data file 6 | Protein sequence prediction | Fasta file (.fasta) | Figshare https://doiorg.publicaciones.saludcastillayleon.es/10.6084/m9.figshare.26021464 [19] |
Data file 7 | Species distribution of BLASTx matches | Image file (.jpg) | Figshare https://doiorg.publicaciones.saludcastillayleon.es/10.6084/m9.figshare.26021485 [20] |
Data file 8 | Gene Ontology annotation | Image file (.jpg) | Figshare https://doiorg.publicaciones.saludcastillayleon.es/10.6084/m9.figshare.26021503 [21] |
Data file 9 | Enzyme Codes annotation | Image file (.jpg) | Figshare https://doiorg.publicaciones.saludcastillayleon.es/10.6084/m9.figshare.26021515 [22] |
Data file 10 | Functional annotation | MS Excel file (.xlsx) | Figshare https://doiorg.publicaciones.saludcastillayleon.es/10.6084/m9.figshare.26021575 [23] |