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Fig. 3 | BMC Research Notes

Fig. 3

From: The importance of data transformation in RNA-Seq preprocessing for bladder cancer subtyping

Fig. 3

Score distribution across classifiers and molecular subtypes interconnections of the consensusMIBC classifier. A Density plot of the score values distribution for each classifier, splitted by log-transformed and non log-transformed values. Shadows in each density plot represent the 95% confidence intervals. B Directed graph with reclassification percentages. Each node represents a consensusMIBC molecular subtype. The size shows the number of samples classified as that specific molecular subtype across methods. The distance between nodes and the width of the links represent the proportion of reclassified samples across methods between the subtypes. Edge colors are inherited by the original node. Edges below 1% were filtered out

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