Table 4 MLVA profiles of V. Cholerae isolates obtained from WGS data using the MLVAtype shiny application
Isolate | Miseq-derived MLVA profile | MinION-derived MLVA profile | GridION-derived MLVA profile |
|---|---|---|---|
CTMA-1402 | (9,7,7,10,16) | Idem | Idem |
CTMA-1421 | (9,7,7,11,17) | Idem | Idem |
CTMA-1424 | (10,7,7,11,15) | Idem | Idem |
CTMA-1426 | (10,7,6,26,20) | Idem | Idem |
CTMA-1427 | (10,7,6,24,21) | Idem | Idem |
CTMA-1432 | (10,7,6,16,20) | Idem | Idem |
CTMA-1435 | (10,7,6,23,18) | Idem | Idem |
CTMA-1461 | (11,7,7,13,16) | Idem | Idem |
CTMA-1473 | (10,7,7,12,16) | Idem | Idem |