Table 1 ARG detection rates across sample types (% of samples where ARG was detected)
Sample type | Â | ermB | sul1 | tetA | tetQ | tetW |
|---|---|---|---|---|---|---|
INF (n = 9) | qPCR | 100% | 100% | 100% | 100% | 100% |
| Â | MGS | 100% | 100% | 100% | 100% | 100% |
EFF (n = 9) | qPCR | 100% | 100% | 100% | 100% | 100% |
| Â | MGS | 100% | 100% | 100% | 100% | 100% |
POND (n = 9) | qPCR | 22.22% | 100% | 100% | 22.22% | 11.11% |
| Â | MGS | 0% | 100% | 77.77% | 0% | 0% |
SED (n = 6) | qPCR | 0% | 100% | 100% | 0% | 16.6% |
| Â | MGS | 0% | 100% | 66.6% | 0% | 16.6% |