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Table 1 Overview of whole-genome sequence data files of four breeds of rock pigeons

From: Whole genome resequencing data for rock pigeon (Columba livia)

Label

Name of data file/data set

File type (file extension)

Data repository and identifier (DOI or accession number)

Bioproject

Columba livia Genome sequencing

Fastq (fq.gz)

https://identifiers.org/ncbi/bioproject:PRJNA532675 [13]

Data set 1

s76_KIZ-FER1/ Feral rock pigeon

Fastq (fq.gz)

NCBI SRA Database

https://identifiers.org/ncbi/insdc.sra:SRR10102989 [14]

Data set 1

s107_KIZ-FER29/ Feral rock pigeon

 

NCBI SRA Database

https://identifiers.org/ncbi/insdc.sra:SRR10102958 [15]

Data set 1

s86_KIZ-FER10/ Feral rock pigeon

 

NCBI SRA Database

https://identifiers.org/ncbi/insdc.sra:SRR10102979 [16]

Data set 1

s92_KIZ-FER16/ Feral rock pigeon

 

NCBI SRA Database

https://identifiers.org/ncbi/insdc.sra:SRR10102972 [17]

Data set 2

s26_KIZ-HOP1/ Homing Pigeon

Fastq (fq.gz)

NCBI SRA Database

https://identifiers.org/ncbi/insdc.sra:SRR10103035 [18]

Data set 2

s37_KIZ-HOP10/ Homing Pigeon

 

NCBI SRA Database

https://identifiers.org/ncbi/insdc.sra:SRR10103025 [19]

Data set 2

s47_KIZ-HOP17/ Homing Pigeon

 

NCBI SRA Database

https://identifiers.org/ncbi/insdc.sra:SRR10103017 [20]

Data set 2

s48_KIZ-HOP18/ Homing Pigeon

 

NCBI SRA Database

https://identifiers.org/ncbi/insdc.sra:SRR10103016 [21]

Data set 3

s1_KIZ-PHF1/ Persian high flyer

Fastq (fq.gz)

NCBI SRA Database

https://identifiers.org/ncbi/insdc.sra:SRR10103052 [22]

Data set 3

s8_KIZ-PHF8/ Persian high flyer

 

NCBI SRA Database

https://identifiers.org/ncbi/insdc.sra:SRR10102985 [23]

Data set 3

s23_KIZ-PHF22/ Persian high flyer

 

NCBI SRA Database

https://identifiers.org/ncbi/insdc.sra:SRR10103038 [24]

Data set 3

s25_KIZ-PHF24/ Persian high flyer

 

NCBI SRA Database

https://identifiers.org/ncbi/insdc.sra:SRR10103036 [25]

Data set 4

s51_KIZ-SHT1/ Shiraz tumbler

Fastq (fq.gz)

NCBI SRA Database

https://identifiers.org/ncbi/insdc.sra:SRR10103015 [26]

Data set 4

s66_KIZ-SHT16/ Shiraz tumbler

 

NCBI SRA Database

https://identifiers.org/ncbi/insdc.sra:SRR10102999 [27]

Data set 4

s68_KIZ-SHT18/ Shiraz tumbler

 

NCBI SRA Database

https://identifiers.org/ncbi/insdc.sra:SRR10102997 [28]

Data set 4

s74_KIZ-SHT24/ Shiraz tumbler

 

NCBI SRA Database

https://identifiers.org/ncbi/insdc.sra:SRR10102990 [29]

  1. The whole genome sequencing data was submitted at NCBI SRA Database with accession number PRJNA532675. A total 95 whole genome sequence files were generated for four different breeds of rock pigeons including feral rock pigeons (29 samples), homing pigeon (18 samples), Persian high flyer (24 samples) and Shiraz tumbler (24 samples). This Table shows the link for the bioproject and also four links were showed for each breeds of rock pigeons
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BMC Research Notes

ISSN: 1756-0500

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